Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3GAL

CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSAMINE

Experimental procedure
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7B
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7B
Temperature [K]289
Detector technologyIMAGE PLATE
Collection date1997-08
DetectorMARRESEARCH
Spacegroup nameC 1 2 1
Unit cell lengths95.590, 54.620, 61.200
Unit cell angles90.00, 115.06, 90.00
Refinement procedure
Resolution20.000 - 1.900
R-factor0.211
Rwork0.211
R-free0.25800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)FREE GALECTIN-7
RMSD bond length0.009
RMSD bond angle30.100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR (3.851)
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.000
High resolution limit [Å]1.9001.900
Rmerge0.058
Total number of observations132648

*

Number of reflections22372
<I/σ(I)>6.85.5
Completeness [%]98.698
Redundancy5.94.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.116

*

CRYSTALS WERE GROWN USING THE HANGING DROP METHOD FROM DROPS CONTAINING 9 MG/ML PROTEIN AT PH 8.1 IN 50 MM SODIUM PHOSPHATE BUFFER, 0.3 M SODIUM CHLORIDE, 20 MM IMIDAZOLE, 8.5% PEG 3350 AND 25 MM GALACTOSAMINE. DROPS WERE EQUILIBRATED AGAINST RESERVOIRS CONTAINING 50 MM SODIUM PHOSPHATE BUFFER, 0.3 M SODIUM CHLORIDE, 20 MM IMIDAZOLE, 17% PEG 3350 AND 50 MM GALACTOSAMINE., vapor diffusion - hanging drop
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein9 (mg/ml)
21dropsodium phosphate50 (mM)
31drop0.3 (M)
41dropimidazol20 (mM)
51dropPEG33508.5 (%)
61reservoirsodium phosphate50 (mM)
71reservoir0.3 (M)
81reservoirimidazole20 (mM)
91reservoirPEG335017 (%)

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon