Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3G8U

DNA binding domain:GilZ 16bp complex-5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyCCD
Collection date2006-09-16
DetectorADSC QUANTUM 210
Wavelength(s)1.115878
Spacegroup nameC 1 2 1
Unit cell lengths116.941, 38.605, 98.518
Unit cell angles90.00, 123.51, 90.00
Refinement procedure
Resolution29.199 - 1.900
R-factor0.2122
Rwork0.210
R-free0.23630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1glu
RMSD bond length0.013
RMSD bond angle1.462
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.970
High resolution limit [Å]1.9001.900
Rmerge0.0750.620
Number of reflections27207
<I/σ(I)>13.41.4
Completeness [%]93.456.7
Redundancy6.42.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.629850mM MES, pH 5.6, 200mM KCl, 10mM MgCl2, 5% PEG 8000, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111MES
211KCl
311MgCl2
412MES
512KCl
612MgCl2
712PEG 8000

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon