3FSD
Crystal structure of NTF2-like protein of unknown function in nutrient uptake (YP_427473.1) from RHODOSPIRILLUM RUBRUM ATCC 11170 at 1.70 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-11-13 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97867,0.97776,0.91162 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 61.018, 61.018, 56.442 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.287 - 1.700 |
R-factor | 0.175 |
Rwork | 0.172 |
R-free | 0.22100 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.684 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.287 | 27.290 | 1.740 |
High resolution limit [Å] | 1.700 | 7.600 | 1.700 |
Rmerge | 0.095 | 0.051 | 0.755 |
Total number of observations | 1286 | 8443 | |
Number of reflections | 12272 | ||
<I/σ(I)> | 15.8 | 34.6 | 2.4 |
Completeness [%] | 100.0 | 98.2 | 100 |
Redundancy | 9.4 | 7.4 | 9.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20.0% polyethylene glycol 3350, 0.2M magnesium chloride, ADDITIVE: 0.001M uridine 5'-monophosphate (UMP), NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K. |