3FON
Crystal structure of the Class I MHC Molecule H-2Kwm7 with a Single Self Peptide VNDIFEAI
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X29A |
| Synchrotron site | NSLS |
| Beamline | X29A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2008-12-04 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 103.607, 68.002, 149.920 |
| Unit cell angles | 90.00, 105.54, 90.00 |
Refinement procedure
| Resolution | 20.000 - 2.030 |
| R-factor | 0.215 |
| Rwork | 0.213 |
| R-free | 0.25100 |
| RMSD bond length | 0.017 |
| RMSD bond angle | 1.694 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.110 |
| High resolution limit [Å] | 2.030 | 4.390 | 2.040 |
| Rmerge | 0.063 | 0.031 | 0.478 |
| Number of reflections | 64629 | ||
| <I/σ(I)> | 18.964 | ||
| Completeness [%] | 99.0 | 98.7 | 91.7 |
| Redundancy | 3.7 | 3.6 | 3.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 20% PEG 3000, 100 mM HEPES, pH 7.5, 200 mM NaCl, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
