3FKH
Crystal structure of Putative pyridoxamine 5'-phosphate oxidase (NP_601736.1) from CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO at 2.51 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-10-13 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.94645,0.97962 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.630, 88.310, 138.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.540 - 2.510 |
R-factor | 0.245 |
Rwork | 0.243 |
R-free | 0.28700 |
Structure solution method | MAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.647 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.540 | 29.540 | 2.590 |
High resolution limit [Å] | 2.510 | 5.350 | 2.500 |
Rmerge | 0.062 | 0.041 | 0.296 |
Number of reflections | 31540 | 6155 | 4321 |
<I/σ(I)> | 15.98 | 33.2 | 2 |
Completeness [%] | 96.0 | 97.8 | 69.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 277 | 0.2000M Ca(OAc)2, 20.0000% PEG-8000, 0.1M MES pH 6.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |