3EK3
Crystal structure of Nitroreductase with Bound FMN (YP_211706.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-08-04 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91162,0.97932,0.97918 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 40.610, 83.730, 116.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.123 - 1.700 |
R-factor | 0.152 |
Rwork | 0.150 |
R-free | 0.18300 |
Structure solution method | MAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.367 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.123 | 29.123 | 1.760 |
High resolution limit [Å] | 1.700 | 3.660 | 1.700 |
Rmerge | 0.058 | 0.021 | 0.521 |
Rmeas | 0.080 | 0.029 | 0.715 |
Total number of observations | 80152 | ||
Number of reflections | 21975 | 4123 | 3959 |
<I/σ(I)> | 10.63 | 31.5 | 1.7 |
Completeness [%] | 96.3 | 97.1 | 94.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277 | 65.0000% MPD, 0.1M TRIS pH 8.0, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP |