Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ECQ

Endo-alpha-N-acetylgalactosaminidase from Streptococcus pneumoniae: SeMet structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
Collection date2006-09-30
DetectorADSC QUANTUM 315
Wavelength(s)0.9795
Spacegroup nameP 21 21 2
Unit cell lengths210.611, 158.209, 112.436
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution112.509 - 2.900
R-factor0.192
Rwork0.190
R-free0.23500
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.225
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.2.17)
Phasing softwareSHARP
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]112.5093.060
High resolution limit [Å]2.9002.900
Rmerge0.1100.592
Total number of observations74051
Number of reflections83445
<I/σ(I)>6.132.4
Completeness [%]99.497.4
Redundancy6.86.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29429% (w/v) PEG MME 2000, 0.2 M lithium citrate, 0.1 M ammonium acetate, VAPOR DIFFUSION, SITTING DROP, temperature 294K

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon