3DH4
Crystal Structure of Sodium/Sugar symporter with bound Galactose from vibrio parahaemolyticus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-02-25 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97930 |
Spacegroup name | P 1 |
Unit cell lengths | 83.280, 109.210, 127.580 |
Unit cell angles | 109.70, 92.02, 102.11 |
Refinement procedure
Resolution | 30.000 - 2.700 |
R-factor | 0.27063 |
Rwork | 0.270 |
R-free | 0.28715 |
Structure solution method | SIRAS |
RMSD bond length | 0.009 |
RMSD bond angle | 1.071 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.113 | 0.429 |
Number of reflections | 103009 | |
<I/σ(I)> | 8.6 | 1.55 |
Completeness [%] | 91.3 | 69.9 |
Redundancy | 4 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 278 | 100 mM Hepes, 200mM Ca Acetate, 20-25% PEG 400, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 278K |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 278 | 100 mM Hepes, 200mM Ca Acetate, 20-25% PEG 400, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 278K |