3DH3
Crystal Structure of RluF in complex with a 22 nucleotide RNA substrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 103 |
Detector technology | CCD |
Collection date | 2007-04-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 89.552, 84.128, 91.354 |
Unit cell angles | 90.00, 94.87, 90.00 |
Refinement procedure
Resolution | 49.510 - 3.000 |
R-factor | 0.2336 |
Rwork | 0.231 |
R-free | 0.27899 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB 2GML |
RMSD bond length | 0.014 |
RMSD bond angle | 1.854 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 6.460 | 3.000 |
Rmerge | 0.121 | 0.057 | 0.480 |
Number of reflections | 27018 | ||
<I/σ(I)> | 6.5 | ||
Completeness [%] | 99.2 | 98.9 | 95.1 |
Redundancy | 3.3 | 3.3 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 298 | 200 mM Ammonium acetate, 25% PEG-3350, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | Ammonium acetate | ||
2 | 1 | 1 | PEG-3350 | ||
3 | 1 | 1 | H2O | ||
4 | 1 | 2 | Ammonium acetate | ||
5 | 1 | 2 | PEG-3350 | ||
6 | 1 | 2 | H2O |