Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3DH3

Crystal Structure of RluF in complex with a 22 nucleotide RNA substrate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]103
Detector technologyCCD
Collection date2007-04-18
DetectorADSC QUANTUM 315r
Wavelength(s)1.1
Spacegroup nameP 1 21 1
Unit cell lengths89.552, 84.128, 91.354
Unit cell angles90.00, 94.87, 90.00
Refinement procedure
Resolution49.510 - 3.000
R-factor0.2336
Rwork0.231
R-free0.27899
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB 2GML
RMSD bond length0.014
RMSD bond angle1.854
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.110
High resolution limit [Å]3.0006.4603.000
Rmerge0.1210.0570.480
Number of reflections27018
<I/σ(I)>6.5
Completeness [%]99.298.995.1
Redundancy3.33.32.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.4298200 mM Ammonium acetate, 25% PEG-3350, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111Ammonium acetate
211PEG-3350
311H2O
412Ammonium acetate
512PEG-3350
612H2O

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon