3DCX
Crystal structure of a duf1696 family protein with a pleckstrin-homology domain (shew_0819) from shewanella loihica pv-4 at 2.00 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-10 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97925,0.91837,0.97871 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.070, 75.320, 139.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.828 - 2.000 |
R-factor | 0.186 |
Rwork | 0.184 |
R-free | 0.22700 |
Structure solution method | MAD |
RMSD bond length | 0.014 |
RMSD bond angle | 1.413 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.828 | 29.830 | 2.070 |
High resolution limit [Å] | 2.000 | 4.300 | 2.000 |
Rmerge | 0.056 | 0.019 | 0.638 |
Number of reflections | 43831 | 8307 | 7885 |
<I/σ(I)> | 11.19 | 37.1 | 1.5 |
Completeness [%] | 97.9 | 97.9 | 95.9 |
Redundancy | 4.05 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.83 | 277 | 37.0% 2-methyl-2,4-pentanediol, 0.15M sodium chloride, 0.1M HEPES pH 6.83, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |