3DB2
Crystal structure of a putative nadph-dependent oxidoreductase (dhaf_2064) from desulfitobacterium hafniense dcb-2 at 1.70 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL1-5 |
Synchrotron site | SSRL |
Beamline | BL1-5 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-02-17 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.978791 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 104.616, 104.616, 173.372 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.748 - 1.700 |
R-factor | 0.14 |
R-free | 0.17400 |
Structure solution method | MAD |
RMSD bond length | 0.009 |
RMSD bond angle | 0.028 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SHELX |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.748 | 29.760 | 1.740 |
High resolution limit [Å] | 1.700 | 7.600 | 1.700 |
Rmerge | 0.100 | 0.061 | 0.772 |
Total number of observations | 14140 | 32645 | |
Number of reflections | 120878 | ||
<I/σ(I)> | 4.6 | 10.5 | 1 |
Completeness [%] | 99.9 | 97.3 | 99.3 |
Redundancy | 9.9 | 9.6 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 8.86 | 293 | 0.17M sodium acetate, 29.6% polyethylene glycol 4000, 15.0% Glycerol, 0.1M TRIS pH 8.86, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K |
2 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 8.14 | 277 | 15.0% Glycerol, 26.7% polyethylene glycol 4000, 0.17M sodium acetate, 0.1M TRIS pH 8.14, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |