3D1R
Structure of E. coli GlpX with its substrate fructose 1,6-bisphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-02-27 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.54178 |
Spacegroup name | P 4 2 2 |
Unit cell lengths | 91.296, 91.296, 84.913 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.650 - 1.850 |
R-factor | 0.17733 |
Rwork | 0.175 |
R-free | 0.21634 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB code 1NI9 protein atoms |
RMSD bond length | 0.020 |
RMSD bond angle | 1.627 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.060 | 0.464 |
Number of reflections | 31306 | |
<I/σ(I)> | 40.1 | 7.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.5 | 13.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 26% PEG400, 0.15M CaCl2, 0.1M Hepes pH 7.5, 2.5 % PEG3350, 20mM MgCl2, 10mM Fructose 1,6 bis phosphate, 2mM L-cysteine, VAPOR DIFFUSION, HANGING DROP, temperature 295K |