Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3D1R

Structure of E. coli GlpX with its substrate fructose 1,6-bisphosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E+ SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2008-02-27
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54178
Spacegroup nameP 4 2 2
Unit cell lengths91.296, 91.296, 84.913
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.650 - 1.850
R-factor0.17733
Rwork0.175
R-free0.21634
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB code 1NI9 protein atoms
RMSD bond length0.020
RMSD bond angle1.627
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.920
High resolution limit [Å]1.8501.850
Rmerge0.0600.464
Number of reflections31306
<I/σ(I)>40.17.2
Completeness [%]100.0100
Redundancy13.513.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529526% PEG400, 0.15M CaCl2, 0.1M Hepes pH 7.5, 2.5 % PEG3350, 20mM MgCl2, 10mM Fructose 1,6 bis phosphate, 2mM L-cysteine, VAPOR DIFFUSION, HANGING DROP, temperature 295K

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon