3CMY
Structure of a homeodomain in complex with DNA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X12B |
| Synchrotron site | NSLS |
| Beamline | X12B |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2008-01-25 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 1.000 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 43.325, 62.243, 92.556 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.500 - 1.950 |
| R-factor | 0.17422 |
| Rwork | 0.172 |
| R-free | 0.21266 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | IFJL |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.533 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.4.0069) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.020 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Number of reflections | 9726 | |
| <I/σ(I)> | 27 | 3 |
| Completeness [%] | 99.7 | 100 |
| Redundancy | 7.6 | 6.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 293 | 19-22% polyethylene glycol 8000, 100 mM ammonium sulphate, 20mM magnesium chloride, 15% 2-methyl-2,4-pentanediol, 50 mM 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid, pH 7.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | polyethylene glycol 8000 | ||
| 10 | 1 | 2 | 2-methyl-2,4-pentanediol | ||
| 11 | 1 | 2 | 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid | ||
| 12 | 1 | 2 | H2O | ||
| 2 | 1 | 1 | ammonium sulphate | ||
| 3 | 1 | 1 | magnesium chloride | ||
| 4 | 1 | 1 | 2-methyl-2,4-pentanediol | ||
| 5 | 1 | 1 | 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid | ||
| 6 | 1 | 1 | H2O | ||
| 7 | 1 | 2 | polyethylene glycol 8000 | ||
| 8 | 1 | 2 | ammonium sulphate | ||
| 9 | 1 | 2 | magnesium chloride |






