3CB7
The crystallographic structure of the digestive lysozyme 2 from Musca domestica at 1.9 Ang.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-03-20 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.427 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 73.903, 96.400, 33.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.900 |
R-factor | 0.18732 |
Rwork | 0.184 |
R-free | 0.25789 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fbd |
RMSD bond length | 0.017 |
RMSD bond angle | 1.664 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.089 | 0.304 |
Number of reflections | 17698 | |
<I/σ(I)> | 14.4 | 2.1 |
Completeness [%] | 90.7 | 74.1 |
Redundancy | 3.9 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 291 | The 3 uL drop was formed by 1.5 uL of protein solution at 9.8 mg/mL in 10 mM MES pH 5.5 plus 1.3 uL of 28% 2-propanol, 0.115 M sodium citrate pH 4.2 and 21% PEG 4000 plus 0.2 uL of 0.2 M ammonium acetate, 0.1 M sodium citrate pH 5.6 and 30% MPD., VAPOR DIFFUSION, SITTING DROP, temperature 291K |