3BZM
Crystal Structure of Open form of Menaquinone-Specific Isochorismate Synthase, MenF
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 105 |
Detector technology | IMAGE PLATE |
Collection date | 2007-01-01 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 72.370, 72.370, 164.010 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.670 - 1.950 |
R-factor | 0.248 |
Rwork | 0.245 |
R-free | 0.30800 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.020 |
RMSD bond angle | 1.975 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.670 | 19.670 | 2.020 |
High resolution limit [Å] | 1.950 | 4.190 | 1.950 |
Rmerge | 0.064 | 0.043 | 0.474 |
Total number of observations | 32714 | 14294 | |
Number of reflections | 36355 | ||
<I/σ(I)> | 14.7 | 42.8 | 2.6 |
Completeness [%] | 98.1 | 99.6 | 84.8 |
Redundancy | 7.97 | 8.03 | 4.61 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | sitting drop vapor diffusion | 8 | 298 | well solution: 0.2M sodium citrate, 6% glycerol, 8% PEG 3350, 5mM chorismic acid. protein solution: 50mM Tris, 5 mM magnesium chloride, 1 mM DTT, pH 7.6, 20 mg/mL. Drops were equal volumes well and protein., sitting drop vapor diffusion, temperature 298K |