3BSS
PglD from Campylobacter jejuni, NCTC 11168, with native substrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2007-10-08 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.97840 |
Spacegroup name | P 43 3 2 |
Unit cell lengths | 162.338, 162.338, 162.338 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.640 - 2.300 |
R-factor | 0.178 |
Rwork | 0.178 |
R-free | 0.19100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bsw |
RMSD bond length | 0.012 |
RMSD bond angle | 1.383 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.110 | 0.607 |
Number of reflections | 33079 | |
<I/σ(I)> | 5.8 | 29.43 |
Completeness [%] | 100.0 | 100 |
Redundancy | 30.2 | 30.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 1.3 M ammonium sulfate, 100 mM cacodylate, pH 6.5 in the resevior; protein solution containing 20 mM HEPES, 150 mM NaCl, pH 7.1, protein concentration of 10 mg/mL, UDP-4-amino-sugar at 5 mM; drop made by mixing 1.5 uL of protein and resevoir solutions, VAPOR DIFFUSION, HANGING DROP, temperature 277K |