3BFM
Crystal structure of a biotin protein ligase-like protein of unknown function (tm1040_0394) from silicibacter sp. tm1040 at 1.70 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-10-26 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.91840, 0.97953, 0.97939 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 86.760, 36.560, 71.000 |
Unit cell angles | 90.00, 99.28, 90.00 |
Refinement procedure
Resolution | 29.553 - 1.700 |
R-factor | 0.182 |
Rwork | 0.179 |
R-free | 0.22600 |
Structure solution method | MAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.458 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.553 | 29.553 | 1.800 |
High resolution limit [Å] | 1.700 | 4.300 | 1.700 |
Rmerge | 0.076 | 0.037 | 0.532 |
Number of reflections | 24223 | 2861 | 7112 |
<I/σ(I)> | 7.08 | 17 | 1.6 |
Completeness [%] | 97.5 | 97.3 | 95.1 |
Redundancy | 3.33 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | NANODROP, 0.2M Ca(OAc)2, 40.0% PEG 400, 0.1M HEPES pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |