3AU1
Crystal structure of mouse CD1d in complex with ganglioside GD3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-11-19 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.656, 98.447, 55.486 |
Unit cell angles | 90.00, 106.68, 90.00 |
Refinement procedure
Resolution | 49.210 - 2.500 |
R-factor | 0.19663 |
Rwork | 0.194 |
R-free | 0.23815 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB code 2GAZ |
RMSD bond length | 0.009 |
RMSD bond angle | 1.576 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.4.0077) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 2.500 |
Number of reflections | 14675 |
Completeness [%] | 99.0 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 22% PEG 4000, 10% isopropanol, 0.1M sodium citrate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |