3ASR
Crystal structure of P domain from Norovirus Funabashi258 stain in the complex with Lewis-a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2008-12-18 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 31 |
Unit cell lengths | 74.733, 74.733, 107.039 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.250 - 1.600 |
R-factor | 0.2015 |
Rwork | 0.201 |
R-free | 0.21820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3asp |
RMSD bond length | 0.007 |
RMSD bond angle | 1.053 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.630 |
High resolution limit [Å] | 1.600 | 4.340 | 1.600 |
Rmerge | 0.059 | 0.045 | 0.478 |
Number of reflections | 87465 | ||
<I/σ(I)> | 18.3 | ||
Completeness [%] | 98.6 | 80.9 | 99.8 |
Redundancy | 10.8 | 8.1 | 8.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging drop | 4.6 | 298 | PEG 6000, hexanediol, pH 4.6, hanging drop, temperature 298K |