3ANU
Crystal structure of D-serine dehydratase from chicken kidney
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2010-03-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000, 1.28179, 1.28284, 1.25510, 1.30300 |
Spacegroup name | P 4 2 2 |
Unit cell lengths | 104.578, 104.578, 81.449 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.000 - 1.900 |
R-factor | 0.19035 |
Rwork | 0.189 |
R-free | 0.21486 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.309 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHARP |
Refinement software | REFMAC (5.4.0078) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 17.000 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 35919 | |
<I/σ(I)> | 26.5 | 3.5 |
Completeness [%] | 99.2 | 99.7 |
Redundancy | 6.9 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 12-15% PEG 4000, 50mM MES-NaOH, 10% 2-propanol, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |