3AK8
Crystal structure of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2009-06-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 94.699, 98.383, 208.915 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.990 - 1.250 |
R-factor | 0.1776 |
Rwork | 0.176 |
R-free | 0.21200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dps |
RMSD bond length | 0.014 |
RMSD bond angle | 1.519 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.283 |
High resolution limit [Å] | 1.250 | 1.250 |
Rmerge | 0.075 | 0.557 |
Number of reflections | 531051 | |
<I/σ(I)> | 18.6 | 3.43 |
Completeness [%] | 99.7 | 97.02 |
Redundancy | 5.4 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.3 | 293 | 0.1M sodium acetate, 0.3M magnesium chloride, 28% PEG 400, pH 5.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K |