3AJG
Crystal structure of PcyA V225D-biliverdin IX alpha complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-10-11 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.046, 74.875, 84.169 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.880 - 1.900 |
R-factor | 0.23403 |
Rwork | 0.231 |
R-free | 0.29483 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2d1e |
RMSD bond length | 0.019 |
RMSD bond angle | 2.281 |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.080 | 0.370 |
Number of reflections | 36692 | |
<I/σ(I)> | 16.9 | |
Completeness [%] | 98.5 | 99.6 |
Redundancy | 6.8 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 293 | 0.8-1.0M NaH2PO4, 1.0-1.2M K2HPO4, 100mM sodium acetate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |