3ABG
X-ray Crystal Analysis of Bilirubin Oxidase from Myrothecium verrucaria at 2.3 angstrom Resolution using a Twin Crystal
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-02-16 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0 |
Spacegroup name | P 63 |
格子定数 [Å] | 139.742, 139.742, 135.561 |
格子定数 [度] | 90.00, 90.00, 120.00 |
精密化法
分解能 | 33.560 - 2.300 |
R因子 | 0.1729 |
Rwork | 0.158 |
R-free | 0.18580 |
Structure solution method | SAD |
結合長の平均二乗偏差(RMSD) [Å] | 0.011 |
結合角の平均二乗偏差(RMSD) [度] | 1.038 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SOLVE |
Refinement software | PHENIX (1.20.1_4487) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 50.000 | 2.380 |
分解能 [Å] (高) | 2.300 | 2.300 |
Rmerge_l_obs | 0.061 | 0.414 |
独立反射数 | 66384 | 6514 |
<I/σ(I)> | 30.2 | 2.4 |
完全性 [%] | 99.5 | 98.4 |
冗長性 | 5.7 | 5.5 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 10% 2-methyl-2,4-pentanediol(MPD), 1.44M ammonium sulfate, 10% glycerol, 0.5M KCl, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 293K |