Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3X1E

Structure of copper-containing nitrite reductase from Geobacillus thermodenitrificans without chloride

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL44XU
Synchrotron siteSPring-8
BeamlineBL44XU
Temperature [K]100
Detector technologyCCD
Collection date2014-05-17
DetectorRAYONIX MX300HE
Wavelength(s)0.90000
Spacegroup nameH 3
Unit cell lengths114.880, 114.880, 84.233
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.340 - 1.250
R-factor0.14216
Rwork0.141
R-free0.17072
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3WKO
RMSD bond length0.021
RMSD bond angle2.112
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.290
High resolution limit [Å]1.2501.250
Number of reflections114829
<I/σ(I)>16.53.6
Completeness [%]99.999.9
Redundancy7.55.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.52930.1 M acetate buffer, 5.0%(w/v) PEG 4000, 75 mM CuSO4, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon