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3WK0

Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-ID-B
Synchrotron siteAPS
Beamline14-ID-B
Temperature [K]100
Detector technologyCCD
DetectorMAR CCD 165 mm
Wavelength(s)0.9797
Spacegroup nameC 2 2 21
Unit cell lengths58.032, 103.562, 73.599
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.780 - 1.410
R-factor0.17
Rwork0.169
R-free0.18800
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3wjy
RMSD bond length0.018
RMSD bond angle1.809
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareREFMAC (5)
Refinement softwareREFMAC (5.5.0066)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]100.0001.430
High resolution limit [Å]1.4101.410
Rmerge0.0420.309
Number of reflections43044
<I/σ(I)>45.66.5
Completeness [%]99.699.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8.5293Sodium citrate, pH 8.5, VAPOR DIFFUSION, temperature 293K

219869

PDB entries from 2024-05-15

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