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3VSN

The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315r
Wavelength(s)1.300
Spacegroup nameP 62
Unit cell lengths118.172, 118.172, 100.099
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution8.740 - 2.000
R-factor0.16775
Rwork0.166
R-free0.19421
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle1.046
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHELXS
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.700
Rmerge0.133
Number of reflections86407
Completeness [%]99.5
Redundancy11.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829350mM Tri-HCl pH8.0, 100mM NaCl, 0.02M citric acid, 0.08M Bis-Tris propane pH8.8, 18% (w/v) PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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