Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VPI

Crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]95
Detector technologyCCD
Collection date2011-11-14
DetectorMAR CCD 165 mm
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths38.450, 63.640, 73.740
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.610 - 1.500
R-factor0.1657
Rwork0.165
R-free0.18340
Structure solution methodSAD
RMSD bond length0.015
RMSD bond angle1.011
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHENIX (1.7_650)
Refinement softwarePHENIX ((phenix.refine: 1.7_650))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]26.6101.580
High resolution limit [Å]1.5001.500
Rmerge0.0800.266
Number of reflections29544
<I/σ(I)>14.74.8
Completeness [%]99.496
Redundancy6.74.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.22931.8M sodium formate, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
1VAPOR DIFFUSION, HANGING DROP6.22931.8M sodium formate, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon