Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3VIP

Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL13C1
Synchrotron siteNSRRC
BeamlineBL13C1
Temperature [K]100
Detector technologyCCD
Collection date2011-03-15
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97622
Spacegroup nameC 1 2 1
Unit cell lengths92.785, 68.500, 75.075
Unit cell angles90.00, 95.38, 90.00
Refinement procedure
Resolution22.900 - 1.280
R-factor0.12162
Rwork0.120
R-free0.14383
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ahz
RMSD bond length0.007
RMSD bond angle1.399
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.330
High resolution limit [Å]1.2801.280
Rmerge0.0360.197
Number of reflections119961
<I/σ(I)>39.38.3
Completeness [%]99.799.8
Redundancy3.83.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52980.1M Bis-Tris, 18-21% (w/v) PEG 3350, 0.1-0.25M MgCl2, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon