3UXU
The structure of the catalytic domain of the Sulfolobus Spindle-shaped viral integrase reveals an evolutionarily conserved catalytic core and supports a mechanism of DNA cleavage in trans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2009-12-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.84917 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 73.963, 73.963, 176.251 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.320 - 2.706 |
R-factor | 0.19394 |
Rwork | 0.193 |
R-free | 0.21442 |
Structure solution method | MAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.496 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | AutoSol |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.750 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.033 | 0.299 |
Number of reflections | 8414 | |
<I/σ(I)> | 5.8 | 42.3 |
Completeness [%] | 99.9 | 100 |
Redundancy | 13.5 | 13.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 295 | 20% PEG 3350, 1% Tryptone, and 0.1 M HEPES at pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 295 | 20% PEG 3350, 1% Tryptone, and 0.1 M HEPES at pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K |