3U9U
Crystal Structure of Extracellular Domain of Human ErbB4/Her4 in complex with the Fab fragment of mAb1479
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-02-16 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0331 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.121, 110.914, 362.051 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.260 - 3.420 |
R-factor | 0.236 |
Rwork | 0.234 |
R-free | 0.27240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ahx 1n8z |
RMSD bond length | 0.009 |
RMSD bond angle | 1.160 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | BUSTER-TNT (BUSTER 2.8.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.520 |
High resolution limit [Å] | 3.400 | 7.320 | 3.400 |
Rmerge | 0.150 | 0.042 | 0.612 |
Number of reflections | 44255 | ||
<I/σ(I)> | 6.2 | ||
Completeness [%] | 95.2 | 86.3 | 95.8 |
Redundancy | 2.9 | 3 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 10% PEG4000, 0.2 M Sodium Acetate, 0.1 M Sodium Citrate pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |