3TD1
Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-02-26 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 33.470, 88.300, 46.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.900 - 2.100 |
Rwork | 0.196 |
R-free | 0.24300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mwl |
RMSD bond length | 0.005 |
RMSD bond angle | 0.800 |
Data reduction software | d*TREK |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.900 | 2.200 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.065 | 0.359 |
Number of reflections | 8461 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.9 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | Sodium Cacodylate, Spermine tetrahydrochloride, Ammonium chloride, 2-methyl-2,4-pentanediol , pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |