3SCZ
Combining crystallographic, thermodynamic, and molecular dynamics studies of Mycobacterium tuberculosis purine nucleoside phosphorylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-02-02 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.431 |
Spacegroup name | H 3 |
Unit cell lengths | 115.590, 115.590, 86.300 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 21.090 - 1.950 |
R-factor | 0.17635 |
Rwork | 0.174 |
R-free | 0.22767 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.017 |
RMSD bond angle | 1.806 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 21.090 | 28.897 | 2.000 |
High resolution limit [Å] | 1.950 | 6.170 | 1.950 |
Rmerge | 0.099 | ||
Number of reflections | 31352 | ||
Completeness [%] | 100.0 | 99.2 | 100 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | MtPNP:INO:SO4 and MtPNP:HX were crystallized using the experimental conditions described elsewhere. PNP solution was concentrated to 25 mg/mL and co-crystallized with INO:SO4 and HX. Hanging drops were prepared mixing 1 uL of protein solution and 1 uL of reservoir solution (100 mM Tris, pH 8.0, 25 % PEG3350, 25 mM MgCl2), VAPOR DIFFUSION, HANGING DROP, temperature 293K |