Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3RV2

Crystal structure of S-adenosylmethionine synthetase from Mycobacterium marinum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyCCD
Collection date2011-04-10
DetectorADSC QUANTUM 315r
Wavelength(s)0.97740
Spacegroup nameP 21 21 2
Unit cell lengths77.600, 196.230, 59.660
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.000
R-factor0.1566
Rwork0.155
R-free0.18700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3iml
RMSD bond length0.015
RMSD bond angle1.381
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.1.4)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0002.050
High resolution limit [Å]2.0008.9402.000
Rmerge0.0430.0130.168
Number of reflections614717993871
<I/σ(I)>29.771.87.62
Completeness [%]98.398.684.7
Redundancy5.84.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5289MymaA.01625.a.A1 PW30103 at 40.19 mg/mL against JCSG+ screen condition E11, 0.16 M calcium acetate, 80 mM sodium cacodylate pH 6.5, 14.4% PEG 8000, 20% glycerol and 25% ethylene glycol as additional cryo-protectant, crystal tracking ID 220762e11, VAPOR DIFFUSION, SITTING DROP, temperature 289K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon