3RIN
p38 kinase crystal structure in complex with small molecule inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2006-08-18 |
Detector | RIGAKU RAXIS IV++ |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.110, 86.620, 123.480 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.780 - 2.200 |
R-factor | 0.2649 |
Rwork | 0.261 |
R-free | 0.30820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ove |
RMSD bond length | 0.020 |
RMSD bond angle | 1.910 |
Data reduction software | CrystalClear (1.3 sp5) |
Data scaling software | CrystalClear (1.3 sp5) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.790 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.080 | 0.410 |
Number of reflections | 20902 | |
Completeness [%] | 93.3 | 96.1 |
Redundancy | 2.97 | 3.03 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 22% PEG3350, 0.2 M sodium chloride, 1 mM THP, 0.1 M Bis-Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |