3RAS
Crystal structure of 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR) complexed with a lipophilic phosphonate inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 93 |
Detector technology | IMAGE PLATE |
Collection date | 2010-10-04 |
Detector | RIGAKU RAXIS HTC |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.250, 65.179, 85.408 |
Unit cell angles | 90.00, 101.28, 90.00 |
Refinement procedure
Resolution | 33.450 - 2.550 |
R-factor | 0.208 |
Rwork | 0.208 |
R-free | 0.27800 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.300 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | CNS (1.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.450 | 2.600 |
High resolution limit [Å] | 2.550 | 2.560 |
Number of reflections | 22365 | |
<I/σ(I)> | 11.2 | 2.2 |
Completeness [%] | 93.9 | 94.5 |
Redundancy | 3.9 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.7 | 295 | MtDXR (10 mg/mL) in 20 mM Tris, pH 7.5, 150 mM NaCl, 2% glycerol, 2 mM MnCl2, 3 mM NADPH was mixed with an equal volume of the crystallization buffer containing 0.2 M (NH4)2SO4, 25% polyethylene glycol 3350, and 0.1 M Bis-Tris, pH 5.7., VAPOR DIFFUSION, HANGING DROP, temperature 295K |