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3R8B

Crystal structure of Staphylococcal Enterotoxin B in complex with an affinity matured mouse TCR VBeta8.2 protein, G5-8

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X6A
Synchrotron siteNSLS
BeamlineX6A
Temperature [K]100
Detector technologyCCD
Collection date2010-03-04
DetectorADSC QUANTUM 270
Spacegroup nameP 21 21 21
Unit cell lengths109.954, 160.370, 186.265
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.570 - 2.950
R-factor0.24705
Rwork0.246
R-free0.26547
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ENTRIES 3SEB AND 2ICW
RMSD bond length0.014
RMSD bond angle1.259
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]121.5313.060
High resolution limit [Å]2.9502.950
Number of reflections66122
<I/σ(I)>16.754.5
Completeness [%]94.799
Redundancy13.913.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5294Gel-filtered SEB/G5-8 complex at 2.5 mg/ml in 100 mM sodium chloride, 50 mM Tris, pH 7.5. 1:1 protein to reservoir solution containing 6.5% PEG8000, 10 mM zinc sulfate, 100 mM ammonium sulfate, 1% glycerol, 100 mM sodium cacodylate, pH 6.5. Microseeded using crystals grown in same condition without ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 294K

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