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3P5G

Structure of the carbohydrate-recognition domain of human Langerin with Blood group B trisaccharide (Gal alpha1-3(Fuc alpha1-2)Gal)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2010-03-31
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.97945
Spacegroup nameP 42
Unit cell lengths79.860, 79.860, 90.170
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.260 - 1.603
R-factor0.181
Rwork0.179
R-free0.21900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.069
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.6.1_357))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.9301.690
High resolution limit [Å]1.6001.600
Rmerge0.0530.240
Number of reflections74505
<I/σ(I)>13.94.8
Completeness [%]100.0100
Redundancy3.83.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7295protein solution: 5 mg mL-1 langerin CRD, 2.5 mM CaCl2, 10 mM Tris pH 8.0, 25 mM NaCl and 5 mM GB. reservoir solution: 0.1 M Hepes pH 7.0, 0.25 M MgCl2 and 20% polyethylene glycol 4000, VAPOR DIFFUSION, HANGING DROP, temperature 295K

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