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3P4U

Crystal structure of active caspase-6 in complex with Ac-VEID-CHO inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
DetectorRIGAKU SATURN 944
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths55.455, 89.500, 61.245
Unit cell angles90.00, 111.73, 90.00
Refinement procedure
Resolution19.900 - 1.900
R-factor0.1514
Rwork0.150
R-free0.18540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.050
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.16)
Phasing softwareMOLREP
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.90419.9042.000
High resolution limit [Å]1.9006.0101.900
Rmerge0.0560.313
Total number of observations990819481
Number of reflections40267
<I/σ(I)>13.610.12.4
Completeness [%]92.196.668.7
Redundancy67.24.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52930.05 M calcium acetate, 0.1 M sodium cacodylate pH 5.5 and 12% PEG 8000, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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