3P0X
Crystal structure of isocitrate lyase from Brucella melitensis, bound to magnesium isocitrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-08-26 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.541780 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.910, 135.930, 181.790 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.600 - 2.350 |
R-factor | 0.18 |
Rwork | 0.178 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3oq8 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.246 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.600 | 2.410 | |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.101 | 0.028 | 0.563 |
Number of reflections | 79958 | 996 | 5817 |
<I/σ(I)> | 12.13 | 47.7 | 2 |
Completeness [%] | 99.8 | 97.6 | 99.2 |
Redundancy | 3.8 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 290 | Internal tracking number 217292B10. Protein (26 mg/mL) and PACT Screen condition B10: 0.2 M MgCl2, 20% PEG6000, 0.1 M MES pH 6.0, 5 mM isocitrate, VAPOR DIFFUSION, SITTING DROP, temperature 290K |