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3OZ4

R-Methyl Carbocyclic LNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2009-03-12
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.9782
Spacegroup nameP 21 21 21
Unit cell lengths26.104, 43.491, 45.974
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.590 - 1.590
R-factor0.1771
Rwork0.172
R-free0.23686
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ey2
RMSD bond length0.019
RMSD bond angle2.133
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.5901.650
High resolution limit [Å]1.5901.590
Rmerge0.0570.527
Number of reflections7451
<I/σ(I)>51.31.8
Completeness [%]99.797.9
Redundancy147.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729120 mM sodium cacodylate, 40 mM potassium chloride, 6 mM spermine tetrahydrochloride, 5% v/v MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
1VAPOR DIFFUSION, HANGING DROP729120 mM sodium cacodylate, 40 mM potassium chloride, 6 mM spermine tetrahydrochloride, 5% v/v MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111sodium cacodylate
211potassium chloride
311spermine tetrahydrochloride
411MPD
512sodium cacodylate
612potassium chloride
712spermine tetrahydrochloride
812MPD

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PDB entries from 2024-05-15

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