Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ODA

Human PARP-1 zinc finger 1 (Zn1) bound to DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12C
Synchrotron siteNSLS
BeamlineX12C
Temperature [K]100
Detector technologyCCD
Collection date2009-09-18
DetectorADSC QUANTUM 270
Wavelength(s)0.99
Spacegroup nameP 1 21 1
Unit cell lengths62.812, 107.334, 86.998
Unit cell angles90.00, 100.61, 90.00
Refinement procedure
Resolution42.420 - 2.640
R-factor0.1989
Rwork0.196
R-free0.24550
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.288
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwarePHENIX (1.6.1_357)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.700
High resolution limit [Å]2.6407.1902.640
Rmerge0.0900.0380.509
Number of reflections33279
<I/σ(I)>9.5
Completeness [%]99.999.599.9
Redundancy4.244.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8.529830% PEG 3350, 100 mM NaAcetate, 100 mM Tris pH 8.5, 0.1 mM TCEP, 20% ethylene glycol, vapor diffusion, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon