Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3O3I

Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OH at its 3'-end

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2010-06-19
DetectorADSC QUANTUM 315
Wavelength(s)0.9792
Spacegroup nameP 41 2 2
Unit cell lengths44.303, 44.303, 147.707
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 2.801
R-factor0.24494
Rwork0.243
R-free0.29701
Starting model (for MR)Hiwi1(V361M)PAZ domain
RMSD bond length0.005
RMSD bond angle0.849
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]20.00020.0002.900
High resolution limit [Å]2.8005.9802.800
Rmerge0.0960.0490.361
Number of reflections3966
<I/σ(I)>14.81.9
Completeness [%]96.695.478.7
Redundancy4.13.92.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62771-5% PEG3350, 50 mM NaCl, 50 mM Na-acetate buffer, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon