3NXW
Crystal structure of Staphylococcal nuclease variant Delta+PHS L125A at cryogenic temperature
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X25 |
| Synchrotron site | NSLS |
| Beamline | X25 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2010-01-25 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 30.947, 60.640, 38.177 |
| Unit cell angles | 90.00, 92.54, 90.00 |
Refinement procedure
| Resolution | 30.920 - 1.650 |
| R-factor | 0.193 |
| Rwork | 0.188 |
| R-free | 0.23780 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3BDC with all H2Os Ca2+ and THP removed and the following truncations: H8A T13A Q30A K64A Q80 T82A M98A Y113A V114A Y115A K116A L125A Q131A K134A K136A; all b-factors were reset to 20 A2. |
| RMSD bond length | 0.017 |
| RMSD bond angle | 1.633 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER (2.1.4) |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.680 |
| High resolution limit [Å] | 1.650 | 4.480 | 1.650 |
| Rmerge | 0.057 | 0.049 | 0.207 |
| Number of reflections | 17169 | ||
| <I/σ(I)> | 20.3 | ||
| Completeness [%] | 99.4 | 98.2 | 93.9 |
| Redundancy | 8.2 | 7.7 | 5.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9 | 277 | 29% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 9.0, vapor diffusion, hanging drop, temperature 277K |






