3NQI
Crystal structure of a Putative lipoprotein (BF3042) from Bacteroides fragilis NCTC 9343 at 1.87 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-05 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97939,0.91837,0.97922 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 157.490, 77.227, 97.406 |
Unit cell angles | 90.00, 103.85, 90.00 |
Refinement procedure
Resolution | 47.287 - 1.870 |
R-factor | 0.192 |
Rwork | 0.191 |
R-free | 0.22000 |
Structure solution method | MAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.491 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0110) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.287 | 47.287 | 1.940 |
High resolution limit [Å] | 1.870 | 4.020 | 1.870 |
Rmerge | 0.071 | 0.035 | 0.753 |
Number of reflections | 93428 | 9436 | 9708 |
<I/σ(I)> | 10.85 | 30.4 | 2.1 |
Completeness [%] | 99.6 | 97.9 | 99.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.1 | 293 | 36.0000% polyethylene glycol 400, 0.1000M Cadmium Chloride, 0.1M sodium acetate pH 5.1, NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 293K |