3NPQ
Structure of the S-adenosylhomocysteine riboswitch at 2.18 A
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X25 |
| Synchrotron site | NSLS |
| Beamline | X25 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-10-02 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9795 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 93.793, 103.241, 69.583 |
| Unit cell angles | 90.00, 97.90, 90.00 |
Refinement procedure
| Resolution | 23.014 - 2.181 |
| R-factor | 0.2358 |
| Rwork | 0.235 |
| R-free | 0.24540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3npn |
| RMSD bond length | 0.001 |
| RMSD bond angle | 0.536 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA (3.3.15) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.4_87) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 23.014 | 23.014 | 2.050 |
| High resolution limit [Å] | 1.950 | 6.160 | 1.950 |
| Rmerge | 0.052 | 1.005 | |
| Rmeas | 0.057 | 1.157 | |
| Rpim | 0.022 | 0.566 | |
| Total number of observations | 9346 | 13006 | |
| Number of reflections | 41336 | ||
| <I/σ(I)> | 31.1 | 1.4 | |
| Completeness [%] | 86.4 | 93.1 | 47 |
| Redundancy | 6.2 | 6.4 | 4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | hanging drop | 7 | 293 | 2.25 mM Spermine, 9 mM magnesium chloride, 0.9 mM spermidine, 2.5 mM Cobalt(III)hexammine chloride, 0.05 M sodium cacodylate pH 7.0, 5% (v/v) PEG 400, hanging drop, temperature 293K |






