Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3NJY

Crystal structure of JMJD2A complexed with 5-carboxy-8-hydroxyquinoline

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
Collection date2009-12-14
DetectorADSC QUANTUM 315
Wavelength(s)0.97860
Spacegroup nameP 21 21 2
Unit cell lengths100.550, 148.990, 56.910
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.678 - 2.600
R-factor0.1823
Rwork0.180
R-free0.22590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2oq6
RMSD bond length0.015
RMSD bond angle1.097
Data reduction softwareMOSFLM
Data scaling softwareSCALA (CCP4_3.3.16)
Phasing softwarePHASER
Refinement softwarePHENIX (1.6_289)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.24041.2402.740
High resolution limit [Å]2.6008.2202.600
Rmerge0.1110.0700.400
Total number of observations382116405
Number of reflections26805
<I/σ(I)>9.4073
Completeness [%]99.097.0897.09
Redundancy4.444.134.37
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52770.1M CITRATE, 4mM NiCl2, 20% PEG 3350, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon