3NDO
Crystal structure of deoxyribose phosphate aldolase from mycobacterium smegmatis
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2010-05-29 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9795 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 46.980, 73.200, 64.380 |
| Unit cell angles | 90.00, 91.00, 90.00 |
Refinement procedure
| Resolution | 33.470 - 1.250 |
| R-factor | 0.124 |
| Rwork | 0.123 |
| R-free | 0.14400 |
| Structure solution method | MR, MR |
| Starting model (for MR) | 1j2w |
| RMSD bond length | 0.018 |
| RMSD bond angle | 1.773 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 33.470 | 1.280 |
| High resolution limit [Å] | 1.250 | 1.250 |
| Rmerge | 0.073 | 0.520 |
| Number of reflections | 119986 | |
| <I/σ(I)> | 14.19 | 5 |
| Completeness [%] | 99.8 | 100 |
| Redundancy | 4.3 | 4.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 290 | JCSG SCREEN CONDITION H10: 100MM BIS-TRIS PH 5.5, 25% PEG 3350, 200 MM AMMONIUM ACETATE; PROTEIN AT 4.6 MG/ML, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K |






