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3MYZ

Protein induced photophysical changes to the amyloid indicator dye, thioflavin T

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2008-11-14
DetectorADSC QUANTUM 315
Wavelength(s)1.00
Spacegroup nameP 1 21 1
Unit cell lengths48.349, 28.467, 74.983
Unit cell angles90.00, 91.42, 90.00
Refinement procedure
Resolution29.270 - 1.600
R-factor0.191
Rwork0.189
R-free0.22300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1kpr
RMSD bond length0.012
RMSD bond angle1.542
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0088)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.830
High resolution limit [Å]1.6001.600
Rmerge0.082
Number of reflections38793
<I/σ(I)>8.89
Completeness [%]98.388.3
Redundancy1.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529825% PEG 3350, 50mM diammonium tartrate, 5mM Thioflavin T, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
1VAPOR DIFFUSION, SITTING DROP7.529825% PEG 3350, 50mM diammonium tartrate, 5mM Thioflavin T, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K

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