3MM3
Dye-decolorizing peroxidase (DyP) D171N in complex with cyanide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2009-06-15 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.954, 97.150, 46.460 |
Unit cell angles | 90.00, 104.04, 90.00 |
Refinement procedure
Resolution | 48.560 - 1.400 |
R-factor | 0.182 |
Rwork | 0.181 |
R-free | 0.18900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2d3q |
RMSD bond length | 0.008 |
RMSD bond angle | 1.203 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.420 |
High resolution limit [Å] | 1.400 | 3.800 | 1.400 |
Rmerge | 0.050 | 0.032 | 0.261 |
Number of reflections | 75208 | ||
<I/σ(I)> | 15.8 | ||
Completeness [%] | 99.0 | 96.5 | 98 |
Redundancy | 3.7 | 3.6 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 278 | PEG 8000, pH 6.0, vapor diffusion, hanging drop, temperature 278K |