3MLM
Crystal structure of Bn IV in complex with myristic acid: A Lys49 myotoxic phospholipase A2 from Bothrops neuwiedi venom
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-10 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1.423 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.801, 70.466, 44.006 |
Unit cell angles | 90.00, 109.32, 90.00 |
Refinement procedure
Resolution | 32.490 - 2.210 |
R-factor | 0.20743 |
Rwork | 0.205 |
R-free | 0.25328 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1pc9 |
RMSD bond length | 0.032 |
RMSD bond angle | 2.579 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0066) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.528 | 2.320 |
High resolution limit [Å] | 2.203 | 2.200 |
Rmerge | 0.090 | 0.306 |
Number of reflections | 10927 | |
<I/σ(I)> | 6.5 | 2.3 |
Completeness [%] | 96.0 | 88.6 |
Redundancy | 11.4 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | Buffer Tris 0.1 M pH 8.5, PEG 4000 30%, lithium sulphate 0.2M, VAPOR DIFFUSION, HANGING DROP, temperature 293K |